2023

  1. Kang JS, Giang VNL, Park HS, Park YS, Cho W, Nguyen VB, Shim H, Waminal NE, Park JY, Kim HH*, Yang TJ*, 2023, Evolution of the Araliaceae family involved rapid diversification of the Asian Palmate group and Hydrocotyle specific mutational pressure. Scientific Reports, 13(1), 22325. https://doi.org/10.1038/s41598-023-49830-7
  2. Mun SJ, Jang W, Park HS, Lim YJ, Yang TJ*, Bong KW*. 2023. Multiplex genotyping of SNPs in genomic DNA via hydrogel-based assay mediated with MutS and polyethylene glycol. Biosensors and Bioelectronics, 241, 115670. https://doi.org/10.1016/j.bios.2023.115670
  3. Mohanan P, Yang TJ*, Song YH*. 2023. Effect of far-red light on the production and diversity of ginsenosides in leaves of Panax ginseng Meyer. Applied Biological Chemistry. 66(1):16. https://doi.org/10.1186/s13765-023-00776-4
  4. Lee M, Lee HY, Kang JS, Lee H, Park KJ, et al. 2023. Authentication of Allium ulleungense, A. microdictyon and A. ochotense based on super-barcoding of plastid genome and 45S nrDNA. PLOS ONE 18(11): e0294457. https://doi.org/10.1371/journal.pone.0294457
  5. Lim C, Kim Y, Shim Y, Cho SH, Yang TJ, Song YH, Kang K*, Paek NC*. 2023, Rice OsGATA16 is a positive regulator for chlorophyll biosynthesis and chloroplast development. Plant J. https://doi.org/10.1111/tpj.16517
  6. Nguyen VB, Kim MJ, Giang VNL, Lee YS, Jayakodi M, Park HS, Mohanan P, Kang KB, Ryu B, Park EJ, Park TK, Yang TY*, 2024, Improved biomass and metabolite production in hairy root culture in various genotypes of Panax ginseng through genetic transformation. Plant Cell Tiss Organ Cult 156, 43. https://doi.org/10.1007/s11240-023-02644-x
  7. Lee S, Sung J, Lee GA, Yoo E, Hwang SJ, Li W, Yang TJ*. 2023. Characterization of Agronomic Traits and Evaluation of Lignan Contents in Asian and African Sesame (Sesamum indicum L.) Germplasms. Korean Journal of Plant Resources, 36(4), 413-434. doi:10.7732/kjpr.2023.36.4.413
  8. Choi J, Kim W, PARK JY, Kang JS*, Yang TJ*. 2023. The complete plastid genome and nuclear ribosomal transcription unit sequences of Spiraea prunifolia f. simpliciflora (Rosaceae). Korean Journal of Plant Taxonomy, 53(1), 32-37. https://doi.org/10.11110/kjpt.2023.53.1.32
  9. Mohanan P, Yang TJ*, Song YH*. 2023. Genes and Regulatory Mechanisms for Ginsenoside Biosynthesis. J Plant Biol. 66(1):87–97. https://doi.org/10.1007/s12374-023-09384-7
  10. Raman G, Choi KS, Lee EM, Morden CW, Shim H, Kang JS, Yang TJ*, Park S*. 2023. Extensive characterization of 28 complete chloroplast genomes of Hydrangea species: A perspective view of their organization and phylogenetic and evolutionary relationships. Computational and Structural Biotechnology Journal, 21, 5073-5091. https://doi.org/10.1016/j.csbj.2023.10.010
  11. Kim JT, Joh HJ, Yu HS, Park YS, Kim JS, Jeong YH, Yang TJ*. 2023. Flowering, Fertilization Characteristics and Speedy Breeding in a Protandry Plant Peucedanum japonicum Thunb. Korean Journal of Plant Resources, 36(4), 402–412. https://doi.org/10.7732/KJPR.2023.36.4.402
  12. Park HS, Mohanan P, Yang TJ*. 2022. Super-Barcoding of Medicinal Materials Based on Complete Plastid Genomes and Nuclear Ribosomal DNA. Book Authentication of Chinese Medicinal Materials by DNA Technology: Techniques and Applications 363-389. https://doi.org/10.1142/9789811261541_0013
  13. Park HS, Jeon JH, Cho W, Lee Y, Park JY, Kim J, Park YS, Koo HJ, Kang JH, Lee TJ, Kim SH, Kim JB, Kwon HY, Kim SH, Paek NC, Jang G, Suh JY, Yang TJ*. 2023. High-throughput discovery of plastid genes causing albino phenotypes in ornamental chimeric plants. Horticulture Research. 10(1):uhac246. https://doi.org/10.1093/hr/uhac246
  14. Koo H, Lee YS, Nguyen VB, Giang VNL, Koo HJ, Park HS, Mohanan P, Song YH, Ryu B, Kang KB, Sung SH, Yang TJ*. 2023. Comparative transcriptome and metabolome analyses of four Panax species explore the dynamics of metabolite biosynthesis. Journal of Ginseng Research. 47(1):44–53. https://doi.org/10.1016/j.jgr.2022.07.001
  15. 2022

  16. Lee SH, Kim J, Park HS, Koo H, Waminal NE, Pellerin RJ, Shim H, Lee HO, Kim E, Park JY, Yu HS, Kim HH, Lee J, Yang TJ*. 2022. Genome structure and diversity among Cynanchum wilfordii accessions. BMC Plant Biology. 22(1):4. https://doi.org/10.1186/s12870-021-03390-y
  17. Dong B, Deng Z, Liu W, Rehman F, Yang TJ, Huang Y, Gong H. 2022. Development of expressed sequence tag simple sequence repeat (EST-SSR) markers and genetic resource analysis of tea oil plants (Camellia spp.). Conservation Genet Resour. 14(1):41–45. https://doi.org/10.1007/s12686-021-01248-x
  18. Peniton EA, Waminal NE, Yang TJ, Kim HH. 2022. Cell cycle synchronization in Panax ginseng roots for cytogenomics research. Hortic Environ Biotechnol. 63(1):137–145. https://doi.org/10.1007/s13580-021-00383-6
  19. Cho W, Jung JK, Kang MY, Seo YW, Park JY, Yang TJ*. 2022. High-throughput SNP markers for authentication of Korean wheat cultivars based on seven complete plastomes and the nuclear genome. Food Sci Biotechnol. 31(4):423–431. https://doi.org/10.1007/s10068-022-01043-w
  20. Lee YS, Woo S, Kim JK, Park JY, Izzah NK, Park HS, Kang JH, Lee TJ, Sung SH, Kang KB, Yang TJ*. 2022. Genetic and chemical markers for authentication of three Artemisia species: A. capillaris, A. gmelinii, and A. fukudo. PLOS ONE. 17(3):e0264576. https://doi.org/10.1371/journal.pone.0264576
  21. Shin H, Park JE, Park HR, Choi WL, Yu SH, Koh W, Kim S, Soh HY, Waminal NE, Belandres HR, Lim JY, Yi G, Ahn JH, Kim JS, Kim YM, Koo N, Kim K, Perumal S, Kang T, Kim J, Jang H, Kang DH, Kim YS, Jeong HM, Yang J, Song S, Park S, Kim JA, Lim YP, Park BS, Hsieh TF, Yang TJ, Choi D, Kim HH, Lee SS, Huh JH. 2022. Admixture of divergent genomes facilitates hybridization across species in the family Brassicaceae. New Phytologist. 235(2):743–758. https://doi.org/10.1111/nph.18155
  22. Lee Y, Park HS, Jeon JH, Park JY, Kim SH, Huh J, Woo S, Jeong DW, Yang TJ*. 2022. Complete plastid and 45S rDNA sequences allow authentication of Liriope platyphylla and Ophiopogon japonicus. Current Plant Biology. 30:100244. https://doi.org/10.1016/j.cpb.2022.100244
  23. Joh HJ, Park HS, Kang JS, Park JY, Yang TJ*. 2022. The complete plastid genome sequence of Peucedanum hakuunense Nakai (Apiaceae), an endemic and rare species in Korea. Mitochondrial DNA Part B [Internet]. [accessed 2023 Jan 26]. https://www.tandfonline.com/doi/abs/10.1080/23802359.2022.2069522
  24. Cho KS, Lee HO, Lee SC, Park HJ, Seo JH, Cho JH, Park YE, Choi JG, Yang TJ*. 2022. Mitochondrial genome recombination in somatic hybrids of Solanum commersonii and S. tuberosum. Sci Rep. 12(1):8659. https://doi.org/10.1038/s41598-022-12661-z
  25. Koo H, Kim S, Park HS, Lee SJ, Paek NC, Cho J, Yang TJ*. 2022. Amplification of LTRs of extrachromosomal linear DNAs (ALE-seq) identifies two active Oryco LTR retrotransposons in the rice cultivar Dongjin. Mobile DNA. 13(1):18. https://doi.org/10.1186/s13100-022-00274-2
  26. Jang W, Jang Y, Cho W, Lee SH, Shim H, Park JY, Xu J, Shen X, Liao B, Jo IH, Kim YC Yang TJ*. 2022. High-Throughput Digital Genotyping Tools for Panax ginseng Based on Diversity among 44 Complete Plastid Genomes. Plant Breed Biotech. 10(3):174–185. https://doi.org/10.9787/PBB.2022.10.3.174
  27. Oh M, Park HS, Um S, Yang TJ, Kim SH. 2022. A comparative phytochemical study of nine Lauraceae species by using chemometric data analysis. PLOS ONE. 17(9):e0273616. https://doi.org/10.1371/journal.pone.0273616
  28. Hong J, Geem KR, Kim J, Jo IH, Yang TJ, Shim D, Ryu H. 2022. Prolonged Exposure to High Temperature Inhibits Shoot Primary and Root Secondary Growth in Panax ginseng. International Journal of Molecular Sciences. 23(19):11647. https://doi.org/10.3390/ijms231911647
  29. Park YS, Kang JS, Park JY, Shim H, Yang HO, Kang JH, Yang TJ*. 2022. Analysis of the complete plastomes and nuclear ribosomal DNAs from Euonymus hamiltonianus and its relatives sheds light on their diversity and evolution. PLOS ONE. 17(10):e0275590. https://doi.org/10.1371/journal.pone.0275590
  30. Lee SH, Jang W, Kim E, Kim J, Gong H, Kang JS, Shim H, Park JY, Yang TJ*. 2022. The complete plastome of Cynanchum rostellatum (Apocynaceae), an indigenous plant in Korea. Mitochondrial DNA Part B. 7(12):2035–2039. https://doi.org/10.1080/23802359.2022.2148489
  31. 2021

  32. Park YS, Park JY, Kang JH, Lee WH and Yang TJ*. 2021. Diversity and authentication of Rubus accessions revealed by complete plastid genome and rDNA sequences. Mitochondrial DNA Part B, 6(4), 1454-1459. https://doi.org/10.1080/23802359.2021.1911712
  33. Lee YS, Kim J, Woo S, Park JY, Park HS,Shim H,Choi HI, Kang JH,Lee TJ,Sung SH, Yang TJ*, Kang KB*. 2021. Assessing the genetic and chemical diversity of Taraxacum species in the Korean Peninsula. Phytochemistry 181:112576. https://doi.org/10.1016/j.phytochem.2020.112576
  34. 박현승, 오혜현, 김성민, 박지영, 김진태, 심현아, 양태진. 2021. 마약성과 비마약성 대마 품종의 식별을 위한 카나비놀 생합성 유전자 분석법. 생약학회지, 52(2), 69-76.
  35. Park HS, Lee WK, Lee SC, Lee HO, Joh HJ, Park JY, Kim S, Song K*, Yang TJ*. 2021. Inheritance of chloroplast and mitochondrial genomes in cucumber revealed by four reciprocal F1 hybrid combinations. Scientific Reports 11: 2506. http://doi.org/10.1038/s41598-021-81988-w
  36. Kong BL, Park HS, Lau TD, Lin Z, Yang TJ, Shaw PC*. 2021. Comparative analysis and phylogenetic investigation of Hong Kong Ilex chloroplast genomes. Scientific Reports 11: 5153. http://doi.org/10.1038/s41598-021-84705-9
  37. Koo H, Shim H, Perumal S, Joh HJ, Yang TJ*. 2021. Genomic Signature for Stem Swollen of Kohlrabi Morphotype in Brassica oleracea. Plant Breeding and Biotechnology 9: 45-54. http://doi.org/10.9787/PBB.2021.9.1.45
  38. Cho W, Shim H, Yang TJ*. 2021. Origin and evolution of Korean ginseng revealed by genome sequence. Journal of Ginseng Culture 3: 1-10.
  39. Perumal S, Waminal NE, Lee J, Koo HJ, Choi BS, Park JY, Ahn KK, Yang TJ*. 2021. Nuclear and Chloroplast Genome Diversity Revealed by Low-Coverage Whole-Genome Shotgun Sequence in 44 Brassica oleracea Breeding Lines. Horticultural Plant Journal. http://doi.org/10.1016/j.hpj.2021.02.004
  40. Shim H, Wanminal NE, Kim HH, Yang TJ*. 2021. Dynamic evolution of Panax species. Genes & Genomics 43: 209-215. http://doi.org/10.1007/s13258-021-01047-6
  41. Shim H, Lee HJ, Lee J, Lee HO, Kim JH, Yang TJ*, Kim NS*. 2021. Plastid Genomes of the Early Vascular Plant Genus Selaginella Have Unusual Direct Repeat Structures and Drastically Reduced Gene Numbers. International Journal of Molecular Sciences 22: 641. http://doi.org/10.3390/ijms22020641
  42. 2020

  43. Perumal S, James B, Tang L, Kagale S, Robinson SJ, Yang TJ, Parkin IAP. 2020. Characterization of B-Genome Specific High Copy hAT MITE Families in Brassica nigra Genome. Frontiers in Plant Science 11: 1104. http://doi.org/10.3389/fpls.2020.01104
  44. 장우종, 조우현, 양태진. 2020. 인삼 분자표지 개발 현황 및 활용. 종자과학과 산업: 한국종자연구회지 16: 9-21.
  45. Koo HJ, Yang TJ*. 2020. RNA editing may stabilize membrane-embedded proteins by increasing phydrophobicity: a study of Zanthoxylum piperitum and Z. schinifolium chloroplast NdhG. GENE. Gene 746: 144638. http://doi.org/10.1016/j.gene.2020.144638
  46. Park HS, Jayakodi M, Lee SH, Jeon JH, Lee HO, Park JY, Moon BC, Kim CK, Wing RA, Newmaster SG, Kim JY, Yang TJ*. 2020. Mitochondrial plastid DNA can cause DNA barcoding paradox in plants. Scientific Reports 10: 6112. http://doi.org/10.1038/s41598-020-63233-y
  47. Lee Y, Park HS, Jeon JH, Park JY, Yang TJ*. 2020. The complete chloroplast genome sequence of a medicinal herb Liriope Platyphylla (Asparagaceae). Mitochondrial DNA Part B: Resources 5: 85-86. http://doi.org/10.1080/23802359.2019.1698327
  48. Nguyen VB, Giang VNL, Waminal NE, Park HS, Kim NH, Jang W, Lee J, Yang TJ*. 2020. Comprehensive comparative analysis of chloroplast genomes from seven Panax species and development of an authentication system based on species-unique SNP markers. Journal of Ginseng Research 44: 135-144. http://doi.org/10.1016/j.jgr.2018.06.003
  49. Jang W, Jang Y, Kim NH, Waminal NE, Kim YC, Lee JW, Yang TJ. 2020. Genetic diversity among cultivated and wild Panax ginseng populations revealed by high-resolution microsatellite markers. Journal of Ginseng Research 33: 637-643. http://doi.org/10.1016/j.jgr.2019.05.008
  50. 2019

  51. Huang R, Wang C, Liang Q, Wang Y, Yang TJ, Zhang Y. 2019. The complete chloroplast genome of Mahonia eurybracteata subsp. Ganpinensis (H.Lev.) T. S. Ying & Boufford (Berberidaceae). Mitochondrial DNA Part B: Resources 4: 3933-3935. http://doi.org/10.1080/23802359.2019.1687346
  52. Lee HO, Joh HJ, Kim K, Lee SC, Kim NH, Park JY, Park HS, Park MS, Kim S, Kwak M, Kim KY, Lee WK, Yang TJ*. 2019. Dynamic Chloroplast Genome Rearrangement and DNA Barcoding for Three Apiaceae Species Known as the Medicinal Herb “Bang-Poong”. Internaltional Journal of Molecular Sciences 20: 2196. http://doi.org/10.3390/ijms20092196
  53. Lee HE, Jo A, Im J, Cha HJ, Kim WJ, Kim HH, Kim DS, Kim W, Yang TJ, Kim HS*. 2019. Characterization of the Long Terminal Repeat of the Endogenous Retrovirus-derived microRNAs in the Olive Flounder. Scientific Reports 9: 14007. http://doi.org/10.1038/s41598-019-50492-7
  54. Mathivathana MK, Murukarthick J, Karthikeyan A, Jang W, Dhasarathan M, Jagadeeshselvam N, Sudha M, Vanniarajan C, Karthikeyan G, Yang TJ, Raveendran M, Pandiyan M, Senthil N. 2019. Detection of QTLs associated with mungbean yellow mosaic virus(MYMV) resistance using the interspecific cross of Vigna radiata ×Vigna umbellate. Journal of Applied Genetics 60: 255-268. http://doi.org/10.1007/s13353-019-00506-xJ
  55. Kang HI, Lee HO, Lee IH, Kim IS, Lee SW, Yang TJ, Shim D. 2019. Complete Chloroplast Genome of Pinus densiflora Siebold & Zucc. and Comparative Analysis with Five Pine Trees. Forests 10: 600. http://doi.org/10.3390/f10070600
  56. Mariyammal I, Seram D, Samyuktha SM,Karthikeyan A, Dhasarathan M, Murukarthick J, Kennedy JS, Malarvizhi D, Yang TJ, Pandiyan M, Senthil N. 2019. QTL mapping in Vigna radiata × Vigna umbellata population uncovers major genomic regions associated with bruchid resistance. Molecular Breeding 39: 110. http://doi.org/10.1007/s11032-019-1006-3
  57. Zhou HC, Pellerin RJ, Waminal NE, Yang TJ*, Kim HH*. 2019. Pre-labelled oligo probe-FISH karyotype analyses of four Araliaceae species using rDNA and telomeric repeat. Genes & Genomics 41: 839-847. http://doi.org/10.1007/s13258-019-00786-x
  58. Jayakodi M, Madheswaran M, Adhimoolam K, Perumal S, Manickam D, Kandasamy T, Yang TJ*, Natesan S*. 2019. Transcriptomes of Indian barnyard millet and barnyardgrass reveal putative genes involved in drought adaptation and micronutrient accumulation. Acta Physiologiae Plantarum 41: 66. http://doi.org/10.1007/s11738-019-2855-4
  59. Lee J, Kang SJ, Shim H, Lee SC, Kim NH, Jang W, Park JY, Kang JH, Lee WH, Lee TJ, Nah G, Yang TJ*. 2019. Characterization of Chloroplast Genomes, Nuclear Ribosomal DNAs, and Polymorphic SSR Markers Using Whole Genome Sequences of Two Euonymus hamiltonianus Phenotypes. Plant Breeding and Biotechnology 7: 50-61. http://doi.org/10.9787/PBB.2019.7.1.50
  60. Kang SJ, Park JY, Jang WJ, Koo HJ, Lee DY, Kim MS, Han SI, Sung SH, Yang TJ*. 2019. The complete chloroplast genome sequence of an invasive plant Lonicera maackii (Caprifoliaceae). Mitochondrial DNA Part B: Resources 4: 1008-1009. http://doi.org/10.1080/23802359.2018.1524722
  61. Kim B, Yang TJ, Kim S. 2019. Identification of a gene responsible for cytoplasmic male-sterility in onions (Allium cepa L.) using comparative analysis of mitochondrial genome sequences of two recently diverged cytoplasm. Theoretical and Applied Genetics 132: 313-322. http://doi.org/10.1007/s00122-018-3218-z
  62. Lee SH, Lee HO, Park HS, Ryu HJ, Kim JW, Choi SH, Park JW, Yang TJ*. 2019. The complete mitochondrial genome of Wolfiporia cocos (Polypolales: Polyporaceae). Mitochondrial DNA Part B: Resources 4: 1010-1011. http://doi.org/10.1080/23802359.2018.1524726
  63. Jeong JH, Park HS, Park JY, Kang TS, Kwon K, Kim YB, Han JW, Kim SH, Sung SH, Yang TJ*. 2019. Two complete chloroplast genome sequences and intra-species diversity for Rehmannia glutinosa (Orobanchaceae). Mitochondrial DNA Part B: Resources 4: 176-177. http://doi.org/10.1080/23802359.2018.1545529
  64. Jayakodi M, Lee SC, Yang TJ*. 2019. Comparative transcriptome analysis of heat stress responsiveness between two contrasting ginseng cultivars. Journal of Ginseng Research 43: 572-579. http://doi.org/10.1016/j.jgr.2018.05.007
  65. 2018

  66. Kim I, Lee SC, Kim EH, Song K, Yang TJ, Kim HU. 2018. Genome-Wide Identification and Expression Analyses of the Fibrillin Family Genes suggest Their Involvement in the Photoprotection in Cucumber. Plants 7(3): 50. http://doi.org/10.3390/plants7030050
  67. Jin SW, Park JY, Kang SJ, Park HS, Shim H, Lee TJ, Kang JH, Sung SH, Yang TJ*. 2018. The complete chloroplast genome sequence of Magic Lily (Lycoris squamigera). Mitochondrial DNA Part B: Resources 3: 1210-1211. http://doi.org/10.1080/23802359.2018.1527193
  68. Jang Y, Park JY, Kang SJ, Park HS, Shim H, Lee TJ, Kang JH, Sung SH, Yang TJ*. 2018. The complete chloroplast genome sequence of Hosta capitata (Koidz.) Nakai (Asparagaceae). Mitochondrial DNA Part B: Resources 3: 1052-1053. http://doi.org/10.1080/23802359.2018.1511858
  69. Kang SJ, Park HS, Koo HJ, Park JY, Lee DY, Kang KB, Han SI, Sung SH, Yang TJ*. 2018. The complete chloroplast genome sequence of Korean Lonicera japonica and intra-species diversity. Mitochondrial DNA Part B: Resources 3: 941-942. http://doi.org/10.1080/23802359.2018.1502637
  70. Kang KB, Kang SJ, Kim MS, Lee DY, Han SI, Kim TB, Park JY, Kim J, Yang TJ*. 2018. Chemical and genomic diversity of six Lonicera species occurring in Korea. Phytochemistry 155: 126-135. http://doi.org/10.1016/j.phytochem.2018.07.012
  71. Kang KB, Jayakodi M, Lee YS, Nguyen VB, Park HS, KOO HJ, Choi I, Kim DH, Chung YJ, Ryu B, Lee DY, Sung SH, Yang TJ*. 2018. Identification of candidate UDP-glycosyl transferases involved in protopanaxadiol-type ginsenoside biosynthesis in Panax ginseng. Scientific Reports 8: 11744. http://doi.org/10.1038/s41598-018-30262-7
  72. Binh NV, Giang VNL, Waminal NE, Park HS, Kim NH, Jang W, Lee J, Yang TJ*. 2018. Comprehensive comparative analysis of chloroplast genomes from seven Panax species and development of an authentication system based on species-unique SNP markers. Journal of Ginseng Research 44: 135-144. http://doi.org/10.1016/j.jgr.2018.06.003
  73. Waminal NE, Pellerin RJ, Kim NS, Jayakodi M, Park JY, Yang TJ*, Kim HH*. 2018. Rapid and Efficient FISH using Pre-Labeled Oligomer Probes. Scientific Reports 8: 8224. http://doi.org/10.1038/s41598-018-26667-z
  74. Kim CK, Seol YJ, Perumal S, Lee J, Waminal NE, Jayakodi M, Lee SC, Jin S, Choi BS, Yu Y, Ko HC, Choi JW, Ryu KY, Sohn SH, Parkin I, Yang TJ*. 2018. Re-exploration of U’s Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences. Scientific Reports 8: 7353. http://doi.org/10.1038/s41598-018-25585-4
  75. Kim NH, Jayakodi M, Lee SC, Choi BS, Jang W, Lee J, Kim HH, Waminal NE, Lakshmanan M, Nguyen BV, Lee YS, Park HS, Koo HJ, Park JY, Perumal S, Joh HJ, Lee H, Kim J, Kim IS, Kim K, Koduru L, Kang KB, Sung SH. Yu Y, Park DS, Choi D, Seo E, Kim S, Kim YC, Hyun DY, Park YI, Kim C, Lee TH, Kim HU, Soh MS, Lee Y, In JG, Kim HS, Kim YM, Yang, DC, Wing RA, Lee DY, Paterson AH, Yang TJ*. 2018. Genome and evolution of the shade-requiring medicinal herb Panax ginseng. Plant Biotechnology Journal 16: 1904-1917. http://doi.org/10.1111/pbi.12926
  76. Jayakodi M, Choi BS, Lee SC, Kim NH, Park JY, Jang W, Lakshmanan M, Mohan SVG, Lee DY, Yang TJ*. 2018. Ginseng Genome Database: an open-access platform for genomics of Panax ginseng. BMC Plant Biology 18: 62. http://doi.org/10.1186/s12870-018-1282-9
  77. Yang K, Nath UK, Biswas MK, Kayum MA, Yi GE, Lee J, Yang TJ*, Nou IS*. 2018. Whole-genome sequencing of Brassica oleracea var. capitate reveals new diversity of the mitogenome. PLOS ONE 13(3): e0194356. http://doi.org/10.1371/journal.pone.0194356
  78. Waminal N E, Pellerin RJ, Jang W, Kim HH*, Yang TJ*. 2018. Characterization of Chromosome-Specific Microsatellite Repeats and Telomere Repeats Based on Low Coverage Whole Genome Sequence Reads in Panax ginseng. Plant Breeding and Biotechnology 6(1): 74-81. http://doi.org/10.9787/PBB.2018.6.1.74
  79. Wang C, Wang Y, Liang Q, Yang TJ, Li Z, Zhang Y. 2018. The complete chloroplast genome of Plagiorhegma dubia Maxim, a traditional Chinese medicinal herb. Mitochondrial DNA Part B: Resources 3(1): 112-113. http://doi.org/10.1080/23802359.2018.1424586
  80. Kang KB, Lee DY, Kim TB, Yang TJ, Sung SH. 2018. Argininosecologanin, a secoiridoid-derived guanidine alkaloid from the roots of Lonicera insularis. Natural Product Research 32: 788-794. http://doi.org/10.1080/14786419.2017.1361953
  81. 2017

  82. Perumal S, Waminal NE, Lee JH, Lee JK, Choi BS, Kim HH, Grandbastien MA, Yang TJ*. 2017. Elucidating the major hidden genomic components of the A, C, and AC genomes and their influence on Brassica evolution. Scientific Reports 7: 17986. http://doi.org/10.1038/s41598-017-18048-9
  83. Kim I, Park JY, Lee YS, Joh HJ, Kang SJ, Murukarthick J, Lee HO, Hur YJ, Kim Y, Kim KH, Lee SC, Yang TJ*. 2017. Discrimination and Authentication of Eclipta prostrata and E. alba Based on the Complete Chloroplast Genomes. Plant Breeding and Biotechnology 5(4): 334-343. http://doi.org/10.9787/PBB.2017.5.4.334
  84. Lee SC, Lee WK, Ali A, Kumar M, Yang TJ*, Song K*. 2017. Genome-Wide Identification of the Dehydrin Genes in the Cucurbitaceae Species. Plant Breeding and Biotechnology 5(4): 282-292. http://doi.org/10.9787/PBB.2017.5.4.282
  85. Lee Hyeon Ju, Koo Hyun Jo, Lee Jonghoon, Lee SC, Lee DY, Vo Ngoc Linh Giang, Minjung Kim, Hyeonah Shim, Jee Young Park, Ki-Oug Yoo, Sang Hyun Sung*, Yang TJ*. 2017. Authentication of Zanthoxylum Species Based on Integrated Analysis of Complete Chloroplast Genome Sequences and Metabolite Profiles. Journal of Agricultural and Food Chemistry 65: 10350-10359. http://doi.org/10.1021/acs.jafc.7b04167
  86. Kim S, Park J, Yeom SI, Yong-Min Kim, Eunyoung Seo, Ki-Tae Kim, Myung-Shin Kim,Je Min Lee, Kyeongchae Cheong, Ho-Sub Shin, Saet-Byul Kim, Koeun Han, Jundae Lee, Minkyu Park,Hyun-Ah Lee, Hye-Young Lee, Youngsill Lee, Soohyun Oh, Joo Hyun Lee, Eunhye Choi, Eunbi Choi,So Eui Lee, Jongbum Jeon, Hyunbin Kim, Gobong Choi, Hyeunjeong Song, JunKi Lee, Sang-Choon Lee, Jin-Kyung Kwon, Hea-Young Lee, Namjin Koo, Yunji Hong, Ryan W. Kim, Won-Hee Kang, Jin Hoe Huh, Byoung-Cheorl Kang, Tae-Jin Yang, Yong-Hwan Lee, Jeffrey L. Bennetzen, Doil Choi. 2017. New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication Genome Biology. Genome Biology 18: 210. http://doi.org/10.1186/s13059-017-1341-9
  87. Lee S, Lee HO, Joh HJ, Kim I, Lee WK, Yang TJ*, Song K . 2017. The complete chloroplast genome sequence with a novel 24-bp deletion of a Korean solid green-type cucumber variety (Cucumis sativus var. sativus). Mitochondrial DNA Part B: Resources 2(2): 755-756. http://doi.org/10.1080/23802359.2017.1398604
  88. Waminal NE, Choi HI, Kim NH, Jang WJ, Lee J, Park JY, Kim HH, Yang TJ*. 2017. A refined Panax ginseng karyotype based on an ultra-high copy 167-bp tandem repeat and ribosomal DNAs. Journal of Ginseng Research 41: 469-476. http://doi.org/10.1016/j.jgr.2016.08.002
  89. Kim I, Park JY, Lee YS, Joh HJ, Kang SJ, Murukarthick J, Lee HO, Hur YJ, Kim Y, Kim KH, Lee SC, Yang TJ*. 2017. The Complete Chloroplast Genome Sequence and Intra-Species Diversity of Rhus chinensis. Plant Breeding and Biotechnology 5(3): 243~251. http://doi.org/10.9787/PBB.2017.5.3.243
  90. Lee YS, Park HS, Lee DK, Jayakodi M, Kim NH, Koo HJ, Lee SC, Kim YJ, Kwon SW, Yang TJ*. 2017. Integrated Transcriptomic and Metabolomic Analysis of Five Panax ginseng Cultivars Reveals the Dynamics of Ginsenoside Biosynthesis. Frontiers in Plant Science 8: 1048. http://doi.org/10.3389/fpls.2017.01048
  91. Lee J, Waminal NE, Choi HI, Perumal S, Lee SC, Nguyen VB, Jang W, Kim NH, Gao LZ, Yang TJ*. 2017. Rapid amplification of four retrotransposon families promoted speciation and genome size expansion in the genus Panax. Scientific Reports 7: 9045. http://doi.org/10.1038/s41598-017-08194-5
  92. Kim KH, Nguyen VB, Dong J, Wang Y, Park JY, Lee SC, Yang TJ*. 2017. Evolution of the Araliaceae family inferred from complete chloroplast genomes and 45S nrDNAs of 10 Panax-related species. Scientific Reports 7: 4917. http://doi.org/10.1038/s41598-017-05218-y
  93. Nguyen VB, Park HS, Lee SC, Lee J, Park JY, Yang TJ*. 2017. Authentication Markers for Five Major Panax Species Developed via Comparative Analysis of Complete Chloroplast Genome Sequences. Journal of Agricultural and Food Chemistry 65: 6298-6306. http://doi.org/10.1021/acs.jafc.7b00925
  94. Lee J, Joh HJ, Kim NH, Lee SC, Jang W, Choi BS, Yu Y, Yang TJ*. 2017. High-Throughput Development of Polymorphic Simple Sequence Repeat Markers Using Two Whole Genome Sequence Data in Peucedanum japonicum. Plant Breeding and Biotechnology 5(2): 134-142. http://doi.org/10.9787/PBB.2017.5.2.134
  95. Lee SC, Lee WK, Ali A, Kumar M, Yang TJ*, Song KH*. 2017. Genome-Wide Identification and Classification of the AP2/EREBP Gene Family in the Cucurbitaceae Species. Plant Breeding and Biotechnology 5: 123-133. http://doi.org/10.9787/PBB.2017.5.2.123
  96. Jang W, Kim NH, Lee J, Waminal NE, Lee SC, Jayakodi M, Choi HI, Park JY, Lee JE, Yang TJ. 2017. A Glimpse of Panax ginseng Genome Structure Revealed from Ten BAC Clone Sequences Obtained by SMRT Sequencing Platform. Plant Breeding and Biotechnology 5(1): 25-35. http://doi.org/10.9787/PBB.2017.5.1.25
  97. Joh HJ, Kim NH, Jayakodi M, Jang W, Park JY, Kim YC, In JG, Yang TJ. 2017. Authentication of Golden-Berry P. ginseng Cultivar ‘Gumpoong’ from a Landrace ‘Hwangsook’ Based on Pooling Method Using Chloroplast-Derived Markers. Plant Breeding and Biotechnology 5(1): 16-24. http://doi.org/10.9787/PBB.2017.5.1.16
  98. Nguyen NQ, Lee SC, Yang TJ, Lee OR*. 2017. cis-Prenyltransferase interacts with a Nogo-B receptor homolog for dolichol biosynthesis in Panax ginseng Meyer. Journal of Ginseng Research 41: 403-410. http://doi.org/10.1016/j.jgr.2017.01.013
  99. Kim YM, Kim S, Koo N, Shin AY, Yeom SI, Seo E, Park SJ, Kang WH, Kim MS, Park J, Jang I, Kim PG, Byeon I, Kim MS, Choi J, Ko G, Hwang J, Yang TJ, Choi SB, Lee JM, Lim KB, Lee J, Choi IK, Park BS, Kwon SY, Choi D, Kim RW. 2017. Genome analysis of Hibiscus syriacus provides insights of polyploidization and indeterminate flowering in woody plants. DNA Research 24(1): 71-80. http://doi.org/10.1093/dnares/dsw049
  100. Lee YS, Park HS, Lee DK, Jayakodi M, Kim NH, Lee SC, Kundu A, Lee DY, KIM YC, IN JG, Kwon SW, Yang TJ*. 2017. Comparative analysis of the transcriptomes and primary metabolite profiles of adventitious roots of five Panax ginseng cultivars. Journal of Ginseng Research 41: 60-68. http://doi.org/10.1016/j.jgr.2015.12.012
  101. Nguyen B, Kim K, Kim YC, Lee SC, Shin JE, Lee J, Kim NH, Jang W, Choi HI, Yang TJ*. 2017. The complete chloroplast genome sequence of Panax vietnamensis Ha et Grushv (Araliaceae). Mitochondrial DNA Part A 28(1): 85-86. http://doi.org/10.3109/19401736.2015.1110810
  102. 2016

  103. Hwang YJ, Lee SC, Kim K, Choi BS, Park JY, Yang TJ, Lim KB. 2016. The complete chloroplast genome of Lilium distichum Nakai (Liliaceae). Mitochondrial DNA Part A 27: 4633-4634. http://doi.org/10.3109/19401736.2015.1101591
  104. Yang K, Lee J, Lee SC, Yang TJ, Kim H, Chung MY, Nou IS. 2016. The complete chloroplast genome of Korean popular Citrus hybrid Hallabong mandarin [(Citrus unshiu x C-sinensis) x C-reticulate] (Rutaceae). Mitochondrial DNA Part B 1: 29-30. http://doi.org/10.1080/23802359.2015.1137805
  105. Lee YS, Kim I, Kim JK, Park JY, Joh HJ, Park HS, Lee HO, Lee SC, Hur YJ, Yang TJ*. 2016. The complete chloroplast genome sequence of Rhus chinensis Mill (Anacardiaceae). Mitochondrial DNA Part B 1(1): 696-697. http://doi.org/10.1080/23802359.2016.1222250
  106. Park JY, Lee YS, Kim JK, Lee HO, Park HS, Lee SC, Kang JH, Lee TJ, Sung SH, Yang TJ*. 2016. The complete chloroplast genome of Eclipta prostrata L. (Asteraceae). Mitochondrial DNA Part B 1(1): 414-415. http://doi.org/10.1080/23802359.2016.1176882
  107. Kim JK, Park JY, Lee YS, Woo SM, Park HS, Lee SC, Kang JH, Lee TJ, Sung SH, Yang TJ*. 2016. The complete chloroplast genomes of two Taraxacum species, T. platycarpum Dahlst. and T. mongolicum Hand.-Mazz. (Asteraceae). Mitochondrial DNA Part B 1(1): 412-413. http://doi.org/10.1080/23802359.2016.1176881
  108. Lee YS, Park JY, Kim JK, Lee HO, Park HS, Lee SC, Kang JH, Lee TJ, Sung SH, Yang TJ*. 2016. The complete chloroplast genome sequences of Artemisia gmelinii and Artemisia capillaris (Asteraceae). Mitochondrial DNA Part B 1(1): 410-411. http://doi.org/10.1080/23802359.2016.1176880.
  109. Lee SC, Kim K, Hwang YJ, Lim KB, Yang TJ*. 2016. The complete chloroplast genomes of Lilium tsingtauense Gilg (Liliaceae). Mitochondrial DNA Part B 1(1): 336-337. http://doi.org/10.1080/23802359.2016.1172052
  110. Kim B, Kim K, Yang TJ, Kim S. 2016. Completion of the mitochondrial genome sequence of onion (Allium cepa L.) containing the CMS-S male-sterile cytoplasm and identification of an independent event of the ccmF N gene split. Current Genetics 62: 873-885. http://doi.org/10.1007/s00294-016-0595-1
  111. Waminal NE, Perumal S, Lee J, Kim HH, Yang TJ. 2016. Repeat Evolution in Brassica rapa (AA), B. oleracea (CC), and B. napus (AACC) Genomes. Plant Breeding and Biotechnology 4(2): 107-122. http://doi.org/10.9787/PBB.2016.4.2.107
  112. Zhang Y, Du L, Liu A, Chen J, Wu L, Hu W, Zhang W, Kim K, Lee SC, Yang TJ*, Wang Y*. 2016. The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses. Frontiers in Plant Science 7: 306. http://doi.org/10.3389/fpls.2016.00306
  113. Kim JK, Park JY, Lee YS, Lee HO, Park HS, Lee SC, Kang JH, Lee TJ, Sung SH, Yang TJ*. 2016. The complete chloroplast genome sequence of the Taraxacum officinale F.H.Wigg (Asteraceae). Mitochondrial DNA Part B 1(1): 228-229. http://doi.org/10.1080/23802359.2016.1155425.
  114. Park HS, Lee J, Lee SC, Yang TJ*, Yoon JB*. 2016. The complete chloroplast genome sequence of Capsicum chinense Jacq. (Solanaceae). Mitochondrial DNA Part B 1(1): 164-165. http://doi.org/10.1080/23802359.2016.1144113
  115. Lee YS, Park JY, Kim JK, Lee HO, Park HS, Lee SC, Kang JH, Lee TJ, Sung SH, Yang TJ*. 2016. The complete chloroplast genome sequence of Artemisia fukudo Makino (Asteraceae). Mitochondrial DNA Part B 1(1): 376-377. http://doi.org/10.1080/23802359.2016.1155426
  116. Lee J, Lee SC, Joh HJ, Lee H, Sung SH, Kang JH, Lee TJ, Yang TJ*. 2016. The complete chloroplast genome sequence of a Korean indigenous ornamental plant Hydrangea serrata for. fertilis Nakai (Hydrangeaceae). Mitochondrial DNA Part B 1(1): 27-28. http://doi.org/10.1080/23802359.2015.1137798
  117. Lee J, Lee H, Lee SC, Joh HJ, Lee H, Sung SH, Kang JH, Lee TJ, Yang TJ*. 2016. The complete chloroplast genome sequence of Ligularia fischeri (Ledeb.) Turcz. (Asteraceae). Mitochondrial DNA Part B 1(1): 4-5. http://doi.org/10.1080/23802359.2015.1137793
  118. Perumal S, Jayakodi M, Kim DS, Yang TJ*, Natesan S*. 2016. The complete chloroplast genome sequence of Indian barnyard millet, Echinochloa frumentacea (Poaceae). Mitochondrial DNA Part B 1(1): 79-80. http://doi.org/10.1080/23802359.2015.1137832
  119. Perumal S, Waminal NE, Lee J, Izzah NK, Jin M, Choi BS, Yang TJ*. 2016. Next-Generation Sequencing Based Transposon Display to Detect High-Throughput Insertion Polymorphism Markers in Brassica. Plant Breeding and Biotechnology 4(4): 285-296. http://doi.org/10.9787/PBB.2016.4.3.285
  120. Lee YS, Park HM, Kim NH, Waminal NE, Kim YJ, Lim KB, Baek JH, Kim HH, Yang TJ*. 2016. Phylogenetic relationship of 40 species of genus Aloe L. and the origin of an allodiploid species revealed by nucleotide sequence variation in chloroplast intergenic space and cytogenetic in situ hybridization. Genetic Resources and Crop Evolution 63: 235-242. http://doi.org/10.1007/s10722-015-0243-5.
  121. Lee J, Izzah NK, Choi BS, Joh HJ, Lee SC, Perumal S, Seo J, Ahn K, Jo EJ, Choi GJ, Nou IS, Yu Y, Yang TJ*. 2016. Genotyping-by-sequencing map permits identification of clubroot resistance QTLs and revision of the reference genome assembly in cabbage (Brassica oleracea L.). DNA Research 23: 29-41. http://doi.org/10.1093/dnares/dsv034
  122. Jang W, Kim KY, Kim K, Lee SC, Park HS, Lee J, Seong RS, Shim YH, Sung SH, Yang TJ*. 2016. The complete chloroplast genome of Cynanchum auriculatum Royle ex Wight (Apocynaceae). Mitochondrial DNA Part A 27(6): 4549-4550. http://doi.org/10.3109/19401736.2015.1101557
  123. Kim K, Lee J, Lee SC, Kim NH, Jang W, Kim S, Sung S, Lee J, Yang TJ*. 2016. The complete chloroplast genome of Eleutherococcus gracilistylus (W.W.Sm.) S.Y.Hu (Araliaceae). Mitochondrial DNA Part A 27(5): 3741-3742. http://doi.org/10.3109/19401736.2015.1079884
  124. Nah G, Im JH, Kim JW, Kim K, Lim J, Choi AY, Choi IY, Yang TJ, Park TS, Lee D, Kim DS*. 2016. The complete chloroplast genomes of three Korean Echinochloa crus-galli accessions. Mitochondrial DNA Part A 27(6): 4357-4358. http://doi.org/10.3109/19401736.2015.1089499
  125. Lee JH, Kim K, Kim NR, Lee SC, Yang TJ*, Kim YD*. 2016. The complete chloroplast genome of a medicinal plant Epimedium koreanum Nakai (Berberidaceae). Mitochondrial DNA Part A 27(6): 4342-4343. http://doi.org/10.3109/19401736.2015.1089492
  126. Kim NR, Kim K, Lee SC, Lee JH, Cho SH, Yu Y, Kim YD, Yang TJ*. 2016. The complete chloroplast genomes of two Wisteria species, W. floribunda and W. sinensis (Fabaceae). Mitochondrial DNA 27(6): 4353-4354. http://doi.org/10.3109/19401736.2015.1089497
  127. Park HS, Kim KY, Kim K, Lee SC, Lee J, Seong RS, Shim YH, Sung SH, Yang TJ*. 2016. The complete chloroplast genome sequence of an important medicinal plant Cynanchum wilfordii (Maxim.) Hemsl (Asclepiadoideae). Mitochondrial DNA Part A 27(5): 3747-3748. http://doi.org/10.3109/19401736.2015.1079887
  128. Kim K, Hwang YJ, Lee SC, Yang TJ*, Lim KB*. 2016. The complete chloroplast genome sequence of Lilium hansonii Leichtlin ex D.D.T.Moore. Mitochondrial DNA Part A 27(5): 3678-3679. http://doi.org/10.3109/19401736.2015.1079852
  129. Lee J, Lee HJ, Kim K, Lee SC, Sung SH, Yang TJ*. 2016. The complete chloroplast genome sequence of Zanthoxylum piperitum. Mitochondrial DNA Part A 27(5): 3525-3526. http://doi.org/10.3109/19401736.2015.1074201
  130. Lee SC, Lee HO, Kim K, Kim S, Yang TJ*. 2016. The complete chloroplast genome sequence of medicinal plant Glehnia littoralis F. Schmidt ex Miq.(Apiaceae). Mitochondrial DNA Part A 27(5): 3674-3675. http://doi.org/10.3109/19401736.2015.1079850
  131. Lee HO, Kim K, Lee SC, Lee J, Lee J, Kim S, Yang TJ*. 2016. The complete chloroplast genome sequence of Ledebouriella seseloides (Hoffm.) H.Wolff. Mitochondrial DNA Part A 27(5): 3498-3499. http://doi.org/10.3109/19401736.2015.1066366
  132. Kim K, Lee SC, Lee J, Kim NH, Jang W, Yang TJ*. 2016. The complete chloroplast genome sequence of Panax quinquefolius (L.). Mitochondrial DNA Part A 27(4): 3033-3034. http://doi.org/10.3109/19401736.2015.1063121
  133. Kim K, Lee SC, Yang TJ*. 2016. The complete chloroplast genome sequence of Dendropanax morbifera (Le´ veille´). Mitochondrial DNA Part A 27(4): 2923-2924. http://doi.org/10.3109/19401736.2015.1060442
  134. 2015

  135. Park, D, Jung JW, Choi BS, Jayakodi, M, Lee J, Lim J, Yu Y, Choi YS, Lee ML, Park Y, Choi IY, Yang TJ, Edwards OR, Nah G*, Kwon HW*. 2015. Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing. BMC Genomics 16: 1. http://doi.org/10.1186/1471-2164-16-1.
  136. Yang K, Robin AHK, Yi GE, Lee J, Chung MY, Yang TJ, Nou IS*. 2015. Diversity and Inheritance of Intergenic Spacer Sequences of 45S Ribosomal DNA among Accessions of Brassica oleracea L. var. capitata. International Journal of Molecular Sciences 16: 28783-28799. http://doi.org/10.3390/ijms161226125
  137. Kim K, Lee SC, Lee J, Yu Y, Yang K, Choi BS, Koh HJ, Waminal NE, Choi HI, Kim NH, Jang W, Park HS, Lee J, Lee HO, Joh HJ, Lee HJ, Park JY, Perumal S, Jayakodi M, Lee YS, Kim B, Copetti D, Kim S, Kim S, Lim KB, Kim YD, Lee J, Cho KS, Park BS, Wing RA, Yang TJ*. 2015. Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species. Scientific Reports 5: 15655. http://doi.org/10.1038/srep15655
  138. Kim S, Shin BK, Lim DK, Yang TJ, Lim J, Park JH, Kwon SW. 2015. Expeditious discrimination of four species of the Panax genus using direct infusion-MS/MS combined with multivariate statistical analysis. Journal of chromatography. B, Analytical Technologies in the Biomedical and Life Sciences 1002: 329-336. http://doi.org/10.1016/j.jchromb.2015.08.034
  139. Jayakodi M, Jung JW, Park D, Ahn YJ, Lee SC, Shin SY, Shin C, Yang TJ*, Kwon HW*. 2015. Genome-wide characterization of long intergenic non-coding RNAs (lincRNAs) provides new insight into viral diseases in honey bees Apis cerana and Apis mellifera. BMC Genomics 16(1): 680. http://doi.org/10.1186/s12864-015-1868-7.
  140. Nah G, Im JH, Kim JW, Park HR, Yook MJ, Yang TJ, Fisher AJ, Kim DS*. 2015. Uncovering the Differential Molecular Basis of Adaptive Diversity in Three Echinochloa Leaf Transcriptomes. PLoS ONE 10(8): e0134419. http://doi.org/10.1371/journal.pone.0134419
  141. Sanderson MJ, Copetti D, Burquez A, Bustamante E, Charboneau JL, Eguiarte LE, Kumar S, Lee HO, Lee J, McMahon M, Steele K, Wing R, Yang TJ, Zwick D, Wojciechowski MF. 2015. Exceptional reduction of the plastid genome of saguaro cactus (Carnegiea gigantea ): Loss of the ndh gene suite and inverted repeat. American Journal of Botany 102: 1115-1127. http://doi.org/10.3732/ajb.1500184
  142. Yi GE, Robin AHK, Yang K, Park JI, Kang JG, Yang TJ, Nou IS. 2015. Identification and Expression Analysis of Glucosinolate Biosynthetic Genes and Estimation of Glucosinolate Contents in edible Organs of Brassica oleracea subspecies. Molecules 20: 10389-13111. http://doi.org/10.3390/molecules200713089
  143. Jayakodi M, Lee SC, Lee YS, Park HS, Kim NH, Jang W, Lee HO, Joh HJ, Yang TJ*. 2015. Comprehensive analysis of Panax ginseng root transcriptomes. BMC Plant Biology 15: 138. http://doi.org/10.1186/s12870-015-0527-0
  144. Lee J, Izzah NK, Jayakodi M, Perumal S, Lee SC, Park JY, Yang KW, Nou IS, Seo J, Yoo J, Suh Y, Ahn K, Choi GJ, Yu Y, Kim H, Yang TJ*. 2015. Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage. BMC Plant Biology 15: 32. http://doi.org/10.1186/s12870-015-0424-6
  145. Kim K, Lee SC, Lee J, Lee HO, Joh HJ, Kim NH, Park HS, Yang TJ*. 2015. Comprehensive survey of genetic diversity in chloroplast genomes and 45S nrDNAs within P. ginseng species. PLoS ONE 10(6): e0117159. http://doi.org/10.1371/journal.pone.0117159
  146. Cho KS, Yun BK, Yoon YH, Hong SY, Manjulatha M, Kim KH, Yang TJ. 2015. Complete chloroplast genome sequence of tartary buckwheat (Fagopyrum tataricum) and comparative analysis with common buckwheat (F. esculentum). PLoS ONE 10: e0125332. http://doi.org/10.1371/journal.pone.0125332
  147. Senthil K, Jayakodi M, Thirugnanasambantham P, Lee SC, Duraisamy P, Purushotham PM, Rajasekaran K, Charles SN, Roy IM, Nagappan AK, Kim GS, Lee YS, Natesan S, Min TS, Yang TJ*. 2015. Transcriptome analysis reveals in vitro cultured Withania somnifera leaf and root tissues as promising source for targeted withanolide biosynthesis. BMC Genomics 16: 14. http://doi.org/10.1186/s12864-015-1214-0.
  148. Kim S, Park JY, Yang TJ*. 2015. Characterization of three active transposable elements recently inserted in three independent DFR-A alleles and one high-copy DNA transposon isolated from the Pink allele of the ANS gene in onion (Allium cepa L.). Molecular Genetics and Genomics 290: 1027-1037. http://doi.org/10.1007/s00438-014-0973-7.
  149. Kayum MA, Jung HJ, Park JI, Ahmed NU, Saha G, Yang TJ, Nou IS. 2015. Identification and expression analysis of WRKY family genes under biotic and abiotic stresses in Brassica rapa. Molecular Genetics and Genomics 290: 70-95. http://doi.org/10.1007/s00438-014-0898-1
  150. Hwang YJ, Yang TJ, Kim HH, Younis A, Lim KB. 2015. Random PCR of Micro-dissected Chromosome Amplified Predominantly Repeated DNA in Lilium tigrinum. International Journal of Agriculture and Biology 17: 169-174.
  151. 2014

  152. Hwang I, Jung HJ, Park JI, Yang TJ, Nou IS. 2014. Transcriptome analysis of newly classified bZIP transcription factors of Brassica rapa in cold stress response. Genomics 104(3): 194-202. http://doi.org/10.1016/j.ygeno.2014.07.008
  153. Kim S, Park JY, Yang TJ*. 2014. Comparative analysis of complete chloroplast genome sequences of a normal male-fertile cytoplasm and two different cytoplasms conferring cytoplasmic male sterility in onion (Allium cepa L.). The Journal of Horticultural Science and Biotechnology 90(4): 459-468. http://doi.org/10.1080/14620316.2015.11513210
  154. Perumal S, Yang TJ*. 2014. Miniature inverted-repeat transposable elements (MITEs) as valuable genomic resources for the evolution and breeding of Brassica crops. Plant Breeding and Biotechnology 2: 322-333. http://doi.org/10.9787/PBB.2014.2.4.322
  155. Ahmed NU, Park JI, Jung HJ, Yang TJ, Hur Y, Nou IS. 2014. Characterization of dihydroflavonol 4-reductase (DFR) gene and their association with cold and freezing stress in Brassica rapa. Gene 550: 46-55. http://doi.org/10.1016/j.gene.2014.08.013
  156. Kim B, Kim DG, Lee G, Seo J, Choi IY, Choi BS, Yang TJ, Kim KS, Lee J, Chin JH, Koh HJ. 2014. Defining the genome structure of ‘Tongil’ rice, an important cultivar in the Korean “Green Revolution”. Rice 7: 22. http://doi.org/10.1186/s12284-014-0022-5
  157. Lee SC, Lee J, Kim NH, Park JY, Kim HU, Lee HO, Choi BS, Kim K, Lee J, Lee MH, Senthil K, Jiang X, Sun C, Kim TH, Yang TJ. 2014. Analysis of Expressed Sequence Tags from a Normalized cDNA Library of Perilla (Perilla frutescense). Journal of Plant Biology 57: 312-320. http://doi.org/10.1007/s12374-014-0263-2
  158. Jayakodi M, Lee SC, Park HS, Jang W, Lee YS, Choi BS, Nah GJ, Kim DS, Natesan S, Sun C, Yang TJ. 2014. Transcriptome profiling and comparative analysis of Panax ginseng adventitious roots. Journal of Ginseng Research 38: 278-288. http://doi.org/10.1016/j.jgr.2014.05.008
  159. Yang KW, Ko JM, Ha HY, Lee YH, Baek IY, Yang TJ, Nou IS. 2014. Development of molecular markers for low raffinose and stachyose in Korean soybean cultivars. Plant Breeding and Biotechnology 2: 151-157. http://doi.org/10.9787/PBB.2014.2.2.151
  160. Jayakodi M, Perumal S, Lee SC, Choi BS, Senthil N, Liu S, Yang TJ. 2014. Brassica TED-a public database for utilization of miniature transposable elements in Brassica species. BMC Research Notes 7: 379. http://doi.org/10.1186/1756-0500-7-379
  161. Liu S, Liu Y, Yang X, Tong C, Edwards D, Parkin IAP, Zhao M, Ma J, Yu J, Huang S, Wang X, Wang J, Lu K, Fang Z, Bancroft I, Yang TJ et al. 2014. The Brassica oleracea genome reveals the assymetrical evolution of polyploidy genomes. Nature Communication 5: 3930. http://doi.org/10.1038/ncomms4930
  162. Perumal S, Yang TJ. 2014. Comparative analysis of Cassandra TRIMs in three Brassicaceae genomes. Plant Genetic Resources: Characterization and Utilization 12: S146-S150. http://doi.org/10.1017/S1479262114000446
  163. Perumal S, Jayakodi M, Izzah NK, Lee J, Choi HI, Shirasawa K, Choi BS, Liu S, Nou IS, Yang TJ. 2014. Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea. PLOS ONE 9(7): e103757. http://doi.org/10.1371/journal.pone.0103757
  164. Kim NH, Choi HI, Kim KH, Jang W, Yang TJ. 2014. Evidence of genome duplication revealed by sequence analysis of multi-loci expressed sequence tag-simple sequence repeat bands in Panax ginseng Meyer. Journal of Ginseng Research 38: 130-135. http://doi.org/10.1016/j.jgr.2013.12.005
  165. Choi HI, Waminal NE, Park HM, Kim NH, Choi BS, Park M, Choi D, Lim YP, Kwon SJ, Park BS, Kim HH, Yang TJ. 2014. Major repeat components covering one-third of the ginseng (Panax ginseng C.A. Meyer) genome and evidence for allotetraploidy. The Plant Journal 77: 906-916. http://doi.org/10.1111/tpj.12441
  166. Izzah NK, Lee J, Jayakodi M, Perumal S, Jin M, Park BS, Ahn K, Yang TJ. 2014. Transcriptome sequencing of two parental lines of cabbage (Brassica oleracea L. var. capitata L.) and construction of an EST-based genetic map. BMC Genomics 15: 149. http://doi.org/10.1186/1471-2164-15-149
  167. Lee S, Lee SC, Byun DH, Ha R, Park JY, Lee JH, Yang TJ. 2014. Association of molecular markers derived from the BrCRTISO1 gene with prolycopene-enriched orange-colored leaves in Brassica rapa. Theoretical and Applied Genetics 127: 179-191. http://doi.org/10.1007/s00122-013-2209-3
  168. Niu Y, Luo H, Sun C, Yang TJ, Dong L, Huang L, Chen S. 2014. Expression profiling of the triterpene saponin biosynthesis genes FPS, SS, SE, and DS in the medicinal plant Panax notoginseng. Gene 553(1): 295-303. http://doi.org/10.1016/j.gene.2013.09.045
  169. Jung J, Kim KH, Yang K, Bang KH, Yang TJ*. 2014. Practical application of DNA markers for high throughput authentication of Panax ginseng and Panax quinquefolius from commercial ginseng products. Journal of Ginseng Research 38: 123-129. http://doi.org/10.1016/j.jgr.2013.11.017
  170. 2013

  171. Um S, Bhandari SR, Kim NH, Yang TJ, Lee JK, Lee YS. 2013. Characterization of Lipophilic Nutraceutical Compounds in Seeds and Leaves of Perilla frutescens. Korean Journal of Horticultural Science and Technology 31(2): 231-238. http://doi.org/10.7235/hort.2013.12177
  172. Lee YS, Ju HK, Kim YJ, Lim TG, Uddin MR, Kim YB, Baek H, Kwon SW, Lee KW, Seo HS, Park SU, Yang TJ. 2013. Enhancement of Anti-Inflammatory Activity of Aloe vera Adventitious Root Extracts through the Alteration of Primary and Secondary Metabolites via Salicylic Acid Elicitation. PLOS ONE 8(12): e82479. http://doi.org/10.1371/journal.pone.0082479
  173. Lee YS, Park HM, Park SU, Baek JH, Yang TJ. 2013. Optimal Protocol for Mass Propagation of Aloe vera. Journal of Crop Science and Biotechnology 16(4): 285-290. http://doi.org/10.1007/s12892-013-0099-1
  174. Um JA, Choi YG, Lee DK, Lee YS, Lim CJ, Youn YA, Lee HD, Cho HJ, Park JH, Seo YB, Kuo HC, Lim J, Yang TJ, Kwon SW, Lee J. 2013. Discrimination between genetically identical peony roots from different regions of origin based on 1H-nuclear magnetic resonance spectroscopy-based metabolomics: determination of the geographical origins and estimation of the mixing proportions of blended samples. Analytical and Bioanalytical Chemistry 405(23): 7523-7534. http://doi.org/10.1007/s00216-013-7182-9
  175. Park JY, Lee YP, Lee J, Choi BS, Kim S*, Yang TJ*. 2013. Complete mitochondrial genome sequence and identification of a candidate gene responsible for cytoplasmic male sterility in radish (Raphanus sativus L.) containing DCGMS cytoplasm. Theoretical and Applied Genetics 126: 1763-1774. http://doi.org/10.1007/s00122-013-2090-0
  176. Izzah NK, Lee J, Perumal S, Park JY, Ahn K, Fu D, Kim GB, Nam YW, Yang TJ*. 2013. Microsatellite-based analysis of genetic diversity in 91 commercial Brassica oleracea L. cultivars belonging to six varietal groups. Genetic Resources and Crop Evolution 60(7): 1967-1986. http://doi.org/10.1007/s10722-013-9966-3
  177. Perumal S, Lee SC, Lee J, Izzah NK, Choi BS, Jin M, Park BS, Yang TJ*. 2013. Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome. BMC Plant Biology 13: 56. http://doi.org/10.1186/1471-2229-13-56
  178. Choi HI, Kim NH, Lee J, Choi BS, Kim KD, Park JY, Lee SC, Yang TJ*. 2013. Evolutionary relationship of Panax ginseng and P. quinquefolius inferred from sequencing and comparative analysis of expressed sequence tags. Genetic Resources and Crop Evolution 60(4): 1377-1387. http://doi.org/10.1007/s10722-012-9926-3
  179. Kim JH, Jung JY, Choi HI, Kim NH, Park JY, Lee Y, Yang TJ*. 2013. Diversity and evolution of major Panax species revealed by scanning the entire chloroplast intergenic space sequences. Genetic Resources and Crop Evolution 60: 413-425. http://doi.org/10.1007/s10722-012-9844-4
  180. 2012

  181. Kim YK, Yang TJ, Kim SU, Park SU. 2012. Biochemical and Molecular Analysis of Ginsenoside Biosynthesis in Panax ginseng during Flower and Berry Development. Journal of the Korean Society for Applied Biological Chemistry 55: 27-34. http://doi.org/10.1007/s13765-012-0005-4
  182. Waminal NE, Park HM, Ryu KB, Kim JH, Yang TJ*, Kim HH*. 2012. Karyotype analysis of Panax ginseng C.A.Meyer, 1843 (Araliaceae) based on rDNA loci and DAPI band distribution. Comparative Cytogenetics 6(4): 425-441. http://doi.org/10.3897/CompCytogen.v6i4.3740
  183. Lee SC, Lim MH, Yu JG, Park BS, Yang TJ*. 2012. Genome-wide characterization of the CBF/DREB1 gene family in Brassica rapa. Plant Physiology and Biochemistry 61: 142-152. http://doi.org/10.1016/j.plaphy.2012.09.016
  184. Hwang YJ, Arens P, Van Tuyl JM, Yang TJ, Lim KB. 2012. Genome Analysis of Lilium tigrinum by Chromosome Microdissection and Molecular Cytogenetic Techniques. Floriculture and Ornamental Biotechnology 6: 84-88.
  185. Kim NH, Choi HI, Ahn IO, Yang TJ*. 2012. Microsatellite marker sets for practical authentication of all nine registered Korean ginseng cultivars. Journal of Ginseng Research 36: 298-307. http://doi.org/10.5142/jgr.2012.36.3.298
  186. Park M, Park J, Kim S, Kwon JK, Park HM, Bae IH, Yang TJ, Lee YH, Kang BC, Choi D. 2012. Evolution of the large genome in Capsicum annuum occurred through accumulation of single-type long terminal repeat retrotransposons and their derivatives. The Plant Journal 69: 1018-1029. http://doi.org/10.1111/j.1365-313X.2011.04851.x
  187. Tuan PA, Park NI, Park WT, Kim YB, Kim JK, Lee J, Lee SH, Yang TJ*, Park SU*. 2012. Carotenoids accumulation and expression of carotenogenesis genes during seedling and leaf development in Chinese cabbage (Brassica rapa subsp. pekinensis). Plant Omics 5(2): 143-148.
  188. Lim JS, Choi BS, Lee JS, Shin C, Yang TJ, Rhee JS, Lee JS*, Choi IY**. 2012. Survey of the Applications of NGS to Whole-Genome Sequencing and Expression Profiling. Genomics & Informatics 10(1): 1-8. http://doi.org/10.5808/GI.2012.10.1.1
  189. Mo YJ, Kim KY, Shin WC, Lee GM, Ko JC, Nam JK, Kim BK, Ko JK, Yu Y, Yang TJ*. 2012. Characterization of Imcrop, a Mutator-like MITE family in the rice genome. Genes & Genomics 34: 189-198. http://doi.org/10.1007/s13258-011-0193-z
  190. 2011

  191. Park M, Jo S, Kwon JK, Park J, Ahn JH, Kim S, Lee YH, Yang TJ, Hur CG, Kang BC, Kim BD, Choi D. 2011. Comparative analysis of pepper and tomato reveals euchromatin expansion of pepper genome caused by differential accumulation of Ty3/Gypsy-like elements. BMC Genomics 12: 85. http://doi.org/10.1186/1471-2164-12-85
  192. Zou J, Fu D, Gong H, Qian W, Xia W, Pires JC, Li R, Long Y, Mason AS, Yang TJ, Lim YP, Park BS, Meng J. 2011. De novo genetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population of Brassica napus derived from interspecific hybridization with Brassica rapa. The Plant Journal 68: 212-224. http://doi.org/10.1111/j.1365-313X.2011.04679.x
  193. Lee YS, Park SU, Baek JH, Wu S, Lim KB, Yang TJ*. 2011. Induction and proliferation of adventitious roots from Aloe vera leaf tissues for in vitro production of Aloe-emodin. Plant Omics Journal 4(4): 190-194.
  194. Choi HI, Kim NH, Kim JH, Choi BS, Ahn IO, Lee JS, Yang TJ*. 2011. Development of Reproducible EST-derived SSR Markers and Assessment of Genetic Diversity in Panax ginseng Cultivars and Related Species. Journal of Ginseng Research 35: 399-412. http://doi.org/10.5142/jgr.2011.35.4.399
  195. 2010

  196. Park NI, Tuan PA, Li X, Kim YK, Yang TJ, Park SU. 2010. An efficient protocol for genetic transformation of Platycodon grandiflorum with Agrobacterium rhizogenes. Molecular Biology Reports 38: 2307-2313. http://doi.org/10.1007/s11033-010-0363-0
  197. Mun JH, Kwon SJ, Seol YJ, Kim JA, Jin M, Kim JS, Lim MH, Lee SI, Hong JK, Park TH, Lee SC, Kim BJ, Seo MS, Baek S, Lee MJ, Shin JY, Hahn JH, Hwang YJ, Lim KB, Park JY, Lee J, Yang TJ, Yu HJ, Choi IY, Choi BS, Choi SR, Ramchiary N, Lim YP, Fraser F, Drou N, Soumpourou E, Trick M, Bancroft I, Sharpe AG, Parkin IAP, Batley J, Edwards D, Park BS. 2010. Sequence and structure of Brassica rapa chromosome A3. Genome Biology 11: R94. http://doi.org/10.1186/gb-2010-11-9-r94
  198. Choi HI, Kim NH, Jung JY, Park HM, Park HS, Park JY, Lee J, Park J, Lee J, Choi BS, Ahn IO, Lee JS, Choi D, Yang TJ. 2010. Current status of Korean ginseng (Panax ginseng) genome mapping and sequencing. Advances in Ginseng Research 2010. 762-778.
  199. Cho K, O’Neill C, Kwon SJ, Yang TJ, Smooker A, Fraser F, Bancroft I. 2010. Sequence-level comparative analysis of the Brassica napus genome around two stearoyl-ACP desaturase loci. The Plant Journal 61: 591-599. http://doi.org/10.1111/j.1365-313X.2009.04084.x
  200. 2009

  201. Hwang YJ, Kim HH, Kwon SJ, Yang TJ, Ko HC, Park BS, Chung JD, Lim KB. 2009. Karyotype analysis of three Brassica species using five different repetitive DNA markers by fluorescence in situ hybridization. Korean Journal of Horticultural Science and Technology 27: 456-463.
  202. Mun JH, Kwon SJ, Yang TJ, Seol YJ, Jin M, Kim JA, Lim MH, Kim JS, Baek S, Choi BS, Yu HJ, Kim DS, Kim N, Lim KB, Lee SI, Hahn JH, Lim YP, Bancroft I, Park BS. 2009. Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication. Genome Biology 10: R111. http://doi.org/10.1186/gb-2009-10-10-r111
  203. Trick M, Kwon SJ, Choi SR, Fraser F, Soumpourou E, Drou N, Wang Z, Lee SY, Yang TJ, Mun JH, Paterson AH, Town CD, Pires JC, Lim YP, Park BS, Bancroft I. 2009. Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis. BMC Genomics 10: 539. http://doi.org/10.1186/1471-2164-10-539
  204. Lee EJ, Shaykhutdinov R, Park SU, Kim YK, Yang TJ, Vogel HJ, Facchini PJ. 2009. Quality assessment of ginseng by 1H NMR metabolite fingerprint and profile analysis. Journal of Agricultural and Food Chemistry 57: 7513-7522. http://doi.org/10.1021/jf901675y
  205. Choi JY, Kwon SJ, Roh JY, Yang TJ, Yoon SH, Kim H, Li MS, Park BS, Woo SD, Jin BR, Kim Y, Je YH. 2009. Sequence and gene organization of 24 circles from the Cotesia plutellae bracovirus genome. Archives of Virology 154: 1313-1327. http://doi.org/10.1007/s00705-009-0441-6
  206. Jo SH, Koo DH, Kim JF, Hur CG, Lee S, Yang TJ, Kwon SY, Choi D*. 2009. Evolution of ribosomal DNA-derived satellite repeat in tomato genome. BMC Plant Biology 9: 42. http://doi.org/10.1186/1471-2229-9-42
  207. Nguyen VD, Ramchiary N, Choi SR, Uhm TS, Yang TJ, Ahn IO, Lim YP*. 2009. Development and characterization of new microsatellite markers in Panax ginseng (C.A. Meyer) from BAC end sequences. Conservation Genetics 11: 1223-1225. http://doi.org/10.1007/s10592-009-9924-y
  208. Choi JY, Kwon SJ, Roh JY, Yang TJ, Li MS, Park BS, Kim YK, Woo SD, Jin BR, Je YH. 2009. Analysis of promoter activity of selected Cotesia plutellae bracovirus genes. Journal of General Virology 90: 1262-1269. http://doi.org/10.1099/vir.0.009472-0
  209. Park JY, Kwon SJ, Choi BS, Lim KB, Hwang YJ, Kim JA, Lim YP, Park BS*, Yang TJ*. 2009. In silico-selection of Brassica rapa organelle genome-derived BACs using their end sequences and sequence level comparative analysis of the 124 kb mitochondrial genome sequences in the family Brassicaceae. Journal of Crop Science and Biotechnology 12: 207-215. http://doi.org/10.1007/s12892-009-0146-0
  210. 김용재, 양태진, 박영훈, 이용직, 강순철, 김용권, 조정래. 2009. 수박 종자크기에 대한 유전분석. 한국육종학회지 41: 412-149.
  211. 김용재, 양태진, 박영훈, 이용직, 강순철, 김용권, 조정래. 2009. 다양한 종자크기를 가진 Near Isogenic 수박 계통 육성 및 종자관련 특성 분석. 한국육종학회지 41: 403-411.
  212. Zou J, Gong H, Yang TJ, Meng J. 2009. Retrotransposons - a major driving force in plant genome evolution and a useful tool for genome analysis. Journal of Crop Science and Biotechnology 12: 1-8. http://doi.org/10.1007/s12892-009-0070-3
  213. 2008

  214. Chang SB, Yang TJ, Datema E, Van Vugt J, Vosman B, Kuipers A, Meznikova M, Szinay D, Lankhorst RK, Jacobsen E, De Jong H*. 2008. FISH mapping and molecular organization of the major repetitive sequences of tomato. Chromosome Research 16: 919-933. http://doi.org/10.1007/s10577-008-1249-z
  215. Van K, Kim DH, Cai CM, Kim MY, Shin JH, Graham MA, Shoemaker RC, Choi BS, Yang TJ, Lee SH*. 2008. Sequence Level Analysis of Recently Duplicated Regions in Soybean [Glycine max (L.) Merr.] Genome. DNA Research 15: 93-102. http://doi.org/10.1093/dnares/dsn001
  216. Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS*. 2008. The first generation of a BAC-based physical map of Brassica rapa. BMC Genomics 9: 280. http://doi.org/10.1186/1471-2164-9-280
  217. Hong CP, Kwon SJ, Kim JS, Yang TJ, Park BS, Lim YP. 2008. Progress in understanding and sequencing the genome of Brassica rapa. International Journal of Plant Genomics 2008: 582837. http://doi.org/10.1155/2008/582837
  218. 양태진, 박범석. 2008. 유전체활용 생물자원 개발. 한국과학기술정보연구원.
  219. 2007

  220. Hong CP, Piao ZY, Kang TW, Batley J, Yang TJ, Hur YK, Bhak J, Park BS, Edwards D, Lim YP. 2007. Genomic distribution of simple sequence repeats in Brassica rapa. Molecules and Cells 23: 349-356.
  221. Yang TJ, Jang SW, Kim WB. 2007. Genetic relationships of Lactuca spp. revealed by RAPD, inter-SSR, AFLP and PCR-RFLP analyses. Journal of Crop Science and Biotechnology 10: 29-34.
  222. Kim JA, Yang TJ*, Kim JS, Park JY, Kwon SJ, Lim MH, Jin M, Lee SC, Lim KB, Choi BS, Um SH, Kim HI, Chun C, Park BS*. 2007. Isolation of circadian-associated genes in Brassica rapa by comparative genomics with Arabidopsis thaliana. Molecules and Cells 23: 145-153.
  223. Yang TJ, Kwon SJ, Kim JS, Jin M, Lim KB, Park JY, Kim JA, Lim MH, Choi BS, Lee HJ, Kim HI, Lim YP, Paterson AH, Park BS. 2007. Characterization of terminal-repeat retrotransposon in miniature (TRIM) in Brassica relatives. Theoretical and Applied Genetics 114: 627-636. http://doi.org/10.1007/s00122-006-0463-3
  224. Kwon SJ, Kim DH, Jin M, Lim MH, Long Y, Meng JL, Lim KB, Kim JA, Kim JS, Jin M, Kim HI, Ahn SN, Wessler SR, Yang TJ*, Park BS*. 2007. Terminal repeat retrotransposon in miniature (TRIM) as DNA markers in Brassica relatives. Molecular Genetics and Genomics 278: 361-370. http://doi.org/10.1007/s00438-007-0249-6
  225. Lim KB*, Yang TJ* Hwang YJ, Kwon SJ, Kim JA, Choi BS, Kim JS, Jin M, Park JY, Kim HI, De Jong H, Park BS. 2007. Characterization of the centromere and peri-centromere retrotransposons in Brassica rapa and their distribution in related Brassica species. The Plant Journal 49: 173-83. http://doi.org/10.1111/j.1365-313X.2006.02952.x
  226. 2006

  227. Choi SR, Hong CP, Koo DH, Plaha P, Yang TJ, Park BS, Bang JW, Lim YP. 2006. Toward understanding Brassica rapa ssp. pekinensis genome and its evolution through BES analysis. Acta Horticulturae 706: 69-72. http://doi.org/10.17660/ActaHortic.2006.706.5
  228. Hong CP, Plaha P, Koo DH, Yang TJ, Choi SR, Lee YK, Uhm T, Bang JW, Edwards D, Bancroft I, Park BS, Lee J, Lim YP. 2006. A Survey of the Brassica rapa genome by BAC-end sequence analysis and comparison with Arabidopsis thaliana. Molecules and Cells 22: 300-307.
  229. Kim JS, Chung TY, King GJ, Jin M, Yang TJ, Jin YM, Kim HI, Park BS. 2006. A sequence-tagged linkage map of Brassica rapa. Genetics 174: 29-39. http://doi.org/10.1534/genetics.106.060152
  230. Cho KS*, Yang TJ*, Hong SY, Kwon YS, Woo JG, Park HG. 2006. Determination of cytoplasmic male sterile factors in onion plants (Allium cepa L.) using PCR-RFLP and SNP markers. Molecules and Cells 21: 411-417.
  231. Yang TJ, Kim JS, Kwon SJ, Lim KB, Kim JA, Choi BS, Jin M, Park JY, Lim MH, Kim HI et al. 2006. Sequence-Level Analysis of the Diploidization Process in the Triplicated FLOWERING LOCUS C Region of Brassica rapa. Plant Cell 18: 1339-1347. http://doi.org/10.1105/tpc.105.040535
  232. Yang TJ, Kim JS, Lim KB, Kwon SJ, Kim JA, Jin M, Park JY, Lim MH, Kim HI, Han JH, Lim YP, Park BS. 2006. An Advanced Strategy for Brassica Genome Sequencing Using Comparative Genomics with Arabidopsis. Acta Horticulturae 706: 73-76. http://doi.org/10.17660/ActaHortic.2006.706.6
  233. 2005

  234. International Rice Genome Sequencing Project (IRGSP). 2005. The map-based sequence of the rice genome. Nature 436: 793-800. http://doi.org/10.1038/nature03895
  235. Yang TJ, Lee S, Chang SB, Yu Y, De Jong H, Wing RA. 2005. In-depth sequence analysis of the tomato chromosome 12 centromeric region: identification of a large CAA block and characterization of pericentromere retrotranposons. Chromosoma 114: 103-117. http://doi.org/10.1007/s00412-005-0342-8
  236. Lim KB, De Jong H, Yang TJ, Park JY, Kwon SJ, Kim JS, Lim MH, Kim JA, Jin M, Jin YM, Kim SH, Lim YP, Bang JW, Kim HI, Park BS. 2005. Characterization of rDNAs and tandem repeats in the heterochromatin of Brassica rapa. Molecules and Cells 19: 436-444.
  237. Yang TJ, Kim JS, Lim KB, Kwon SJ, Kim JA, Jin M, Park JY, Lim MH, Kim HI, Kim SH, Lim YP, Park BS. 2005. The Korea brassica genome project: a glimpse of the brassica genome based on comparative genome analysis with Arabidopsis. Comparative and Functional Genomics 6: 138-146. http://doi.org/10.1002/cfg.465
  238. Yang TJ, Yu Y, Lee S, Chang SB, Oh CS, Ahn SN, De Jong H, Wing RA. 2005. Toward closing rice telomere gaps: mapping and sequence characterization of rice subtelomere regions. Theoretical and Applied Genetics 111: 467-478. http://doi.org/10.1007/s00122-005-2034-4
  239. 2004

  240. Yang TJ, Yu Y, Frisch D, Lee S, Kim HR, Kwon SJ, Park BS, Wing RA. 2004. Construction of Various Copy Number Plasmid Vectors and Their Utility for Genome Sequencing. Genomics & Informatics 2: 174-179.
  241. Jang I, Moon JH, Yoon JB, Yoo JH, Yang TJ, Kim YJ, Park HG. 2004. Application of RAPD and SCAR markers for purity testing of F1 hybrid seed in chili pepper (Capsicum annuum). Molecules and Cells 18: 295-299.
  242. Budiman MA, Chang SB, Lee S, Yang TJ, Zhang HB, De Jong H, Wing RA. 2004. Localization of jointless-2 gene in the centromeric region of tomato chromosome 12 based on high resolution genetic and physical mapping. Theoretical and Applied Genetics 108: 190-196. http://doi.org/10.1007/s00122-003-1429-3
  243. 2003

  244. The Rice Chromosome 10 Sequencing Consortium: Yu Y, Rambo T, Currie J, Saski C, Kim HR, Collura K, Thompson S, Simmons J, Yang TJ, Park GN et al. 2003. In-depth view of structure, activity, and evolution of rice chromosome 10. Science 300: 1566-1569. http://doi.org/10.1126/science.1083523
  245. Yang TJ, Yu Y, Nah GJ, Atkins M, Lee S, Frisch DA, Wing RA. 2003. Construction and utility of 10-kb libraries for efficient clone-gap closure for rice genome sequencing. Theoretical and Applied Genetics 107: 652-660. http://doi.org/10.1007/s00122-003-1302-4
  246. 2002

  247. Cho KS, Han YH, Lee JT, Hu EJ, Yang TJ, Woo JG. 2002. Pathogenic Differentiation of Plasmodiophora brassicae and Selection ofChinese Cabbage Cultivars Resistant to Clubroot Disease in Highland. Korean Journal of Breeding Science 36: 168-173.
  248. Jang SW, Yang TJ, Shin PG, Kim WB, Choi JK, Park HY. 2002. Identification of Inheritance and Stability of T4 and T5 Progeny Transgenic Tomatoes Resistant to Tobacco Mosaic Virus. Journal of the Korean Society for Horticultural Science 43: 497-500.
  249. 2001

  250. Tomkins JP, Peterson DG, Yang TJ, Main D, Wilkins TA, Paterson AH, Wing RA. 2001. Development of genomic resources for cotton (Gossypium hirsutum L.): BAC library construction, preliminary STC analysis, and identification of clones associated with fiber development. Molecular Breeding 8: 255-261. http://doi.org/10.1023/A:1013798716098
  251. Tomkins JP, Peterson DG, Yang TJ, Main D, Ablett EF, Henry RJ, Lee LS, Holton TA, Waters D, Wing RA. 2001. Grape (Vitis vinifera L.) BAC Library Construction, Preliminary STC Analysis, and Identification of Clones Associated with Flavonoid and Stilbene Biosynthesis. American Journal of Enology and Viticulture 52: 287-291.
  252. Cho KS, Yang TJ, Kwon YS, Woo JG. 2001. Development and application of SCAR markers related to cytoplasmic factor of male sterility in onion (Allium cepa L.). Journal of the Korean Society for Horticultural Science 42: 527-532.
  253. 2000

  254. Jang SW, Yang TJ, Kim WB. 2000. Planting space of truss tomao for summer season cultivation in the alpine area. Journal of the Korean Society for Horticultural Science 41: 109-113.
  255. Jang SW, Yang TJ, Kim WB. 2000. Characterictics and resistance to soft rot of indigenous elaf lettuce in Korea. Journal of the Korean Society for Horticultural Science 41: 114-118.
  256. 1999

  257. Yang TJ, Kim DH, Kuo GC, Park HG. 1999. Inheritance of hypocotyl purple color and seed coat luster, and RFLP mapping of luster gene in mungbean (Vigna radiata). Korean Journal of Breeding Science 31: 138-146.
  258. Yang TJ, Kim YJ, Park HG. 1999. Construction of linkage map in Capsicum annuum L using RAPD marker and identification of two QTLs. Journal of Plant Biotechnology 1: 109-115.
  259. 1998

  260. Yang TJ, Park HG. 1998. Optimization of RAPD condition in Capsicum annuum. Korean Journal of Breeding Science 30: 16-23.
  261. Yang TJ, Park HG. 1998. Genetic study of several characters in Capsicum annuum L. RDA Journal of Horticultural Science 40: 1-8.
  262. Yang TJ, Kim DH, Kuo GC, Kumar L, Young ND, Park HG. 1998. RFLP marker - assisted selection in backcross breeding for introgression of the bruchid resistance gene in mungbean. Korean Journal of Breeding Science 30: 9-15.
  263. 1997

  264. Jang SW, Ku JH, Lee JN, Lee JT, Yang TJ, Kim WB, Eom YH. 1997. Optimum planting time and pinching cluster of red ripe tomato in alpine area. RDA Journal of Horticultural Science 39: 35-40.
  265. Jang SW, Ku JH, Lee JN, Lee JT, Yang TJ, Kim WB, Eom YH. 1997. Growth characteristics and yield of head lettuce (Lactuca sativa var capitata) in alpine area. RDA Journal of Horticultural Science 39: 54-61.
  266. Jang SW, Yang TJ, Shin PG, Kim WB, Choi JK, Park HY. 1997. TMV cp gene mediated resistance to TMV in transgenic tomato. RDA Journal of Horticultural Science 40: 107-113.
  267. Yang TJ, Park HG. 1997. Increase of Polymorphism by using Restriction Fragment-Random Amplified Polymorphic DNA (RF-RAPD) in Capsicum annuum L. Journal of the Korean Society for Horticultural Science 38: 688-692.